Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932563.1_cds_XP_016479044.1_70623
CDS Infomation

[gene=LOC107800394] [db_xref=GeneID:107800394] [protein=exocyst complex component EXO84B-like] [protein_id=XP_016479044.1] [location=join(6042..6209,9662..9759,9969..11022,11776..12291,12850..13038,13131..13267,13557..13719)] [gbkey=CDS]
Sequence

ATGGCTTCCGTGAAATCCTCTCGGTCAAGAGCACACGCGGTCACTCCGTCTAAAGGAATC
AACAAAGAAAGCGGCACCAAGCTCGAAGAAAATCTCAACGTCTTCAAATCGGATAATTTC
GATGCTGATGCCTTTGTTCAGTCCAAATGTCATTCTCTCAACGAGAAGGAAATAAGGCAG
TTGTGCTCGTATCTATTGGATCTGAAAAGGGCTTCTGCTGAGGAAATGCGCAAAAGTGTG
TATGCCAACTATACAGCTTTCATTCGCACATCAAAAGAGATATCAGATTTGGAGGGTGAG
CTTTCATCCATGAAAAACTTGCTATCTACTCAGGCAACTTTAATTCATGGTCTAGCTGAG
GGGGTTCATATTGATTCTTTGTCTGATGATGCTCCTGAGTCTGCCTCCAATGGCTCTTCT
AATGATGAAGTCAGGGAGCCTACGGACCTAGAGAAGTGGCTAACGGAGTTTCCTGATCTC
CTAGATGTTCTGTTAGCTGAAAGGAGAGTAGATGAAGCATTGTCGAGTCTTGATGAAGGA
GAACGCATTGCGTCTGAAGCAAAAGAGAAGAAGACATTGGGTCATGCTGTGCTTTTTTCA
CTACAAACTGCCATTGCTGAACGTAGGCAAAAGCTAGCTGATCAGCTCGCTGAAATTGCT
TGCCAACCTTCTACTCGTGGTGCCGAGCTTCGTGCTGCTATTTCAGCTCTTAAAAAGCTT
GGGGATGGCCCCCGTGCTCATAGTTTACTCCTTAATGCTCATTACCAGAAATACCAGTTC
AACATGAAAAATCTCCGTCCATCTAGCACCTCTTATGGAGGAGCTTATACTGCCGCCCTT
TCACAGCTGGTATTCTCTGCCATTGCTCAAGCAGCGACTGATTCATTGGCTATTTTTGGT
AAAGAGCCAGCTTATACATCCGAGCTAGTGATGTGGGCTACTAAGCAGACAGAGGCATTT
GCACTTTTGGTCAAAAGGCATGCATTAACTTCATCTGCAGCTGCTGGTGGCTTACGAGCT
GCTGCAGAATGTGTTCAAATAGCTTTAGGACACTGTTCTTTATTGGAAGCTCGTGGGCTT
GCACTTTGCCCTGTGCTTCTGAAGCTTTTTAGACCTAGTGTTGAGCAAGCGCTAGATGCC
AACTTGAAACGAATTGAAGAAAGCACTGCTGCTTTGGCAGCTGCTGATGATTGGGAACTC
ACGTATCCACCATCTGTTACACGCACATCCGGTAGGCCAGCCGGTGCTGTTCTTGGCTCT
ACAGGGGCATATCAGCATAAACTTTCAAGTAGTGCTCATCGTTTCAATTTGATGGTTCAG
GATTTCTTTGAGGATGTGGGACCATTGCTAAGTATGCAGTTGGGAGGGAAAGCTTTGGAA
GGTCTATTTCAGGTGTTTAATTCTTACGTGAACACACTTATAAGAGCATTACCTGGCTCC
ATAGAGGACGAGACCAGCTTTGAAGGTTCAGGAAATAAAATTGTTCGCATGGCCGAGACT
GAAGCTCAGCAAATTGCTTTGCTTGCAAACGCATCTTTATTGGCAGACGAACTATTGCCA
CGTGCAGCTATGAAGCTTGCTCCCTTGAATCAGGCTAATTACAAGGATGATCTTCAAAGA
AGAGCTTCAGATAGGCAAAGCCGTCACCCCGAGCAAAGGGAATGGAAAAAGCGTCTTGTG
AATTCAGTTGACCGGTTAAAGGATAGCTTTTGTCAGCAGCATGCTCTGGATCTTATTTTC
ACAGAGGAAGGGGACAGCCATCTCTCTGCCGAAATGTATATAAACATGGAGGGGAACGCT
GACGAGATAGAATGGTTCCCTTCTCTAATATTCCAGGAACTTTATGTCAAACTAAACAGA
ATGGCTGCCATAGCTGCTGATATGTTTGTAGGAAGGGAAAGATTTGCAATATTGTTGTTG
ATGAGGCTTACAGAAACTGTCATCTTGTGGCTTTCACAAGATCAGAGCTTTTGGGATGAT
ATAGAGGAAGGACCAAGGCCATTGGGTCATCTTGGTCTTCAGCAGTTCTATTTGGATATG
AAATTTGTCACATGCTTTGCTTCGCAAGGACGCTACTTATCTAGAAATTTGCTTCGGGTC
GTCAATGACATAATCTCTAAAGCAATGTCAGCCTTTGCTTCAACTGGGATGGATCCATAT
AGTGTTCTCCCTGACGATGATTGGTTCACTGAAATTGCTCAAGATGCGATAGAGAGGCTG
AGCGGAAAGCCCAAAGTTGCTAATGGGGAAAGGGATCTGAACAGTCCAACTGCCTCTGTC
TCAGCTCAATCTATGTCTTCTGTCAGATCTCACGGGAGTTATTGA

Peptide Sequence

PEP ID

XP_016479044.1
PEP Infomation

PREDICTED: exocyst complex component EXO84B-like [Nicotiana tabacum]
Sequence

MASVKSSRSRAHAVTPSKGINKESGTKLEENLNVFKSDNFDADAFVQSKCHSLNEKEIRQ
LCSYLLDLKRASAEEMRKSVYANYTAFIRTSKEISDLEGELSSMKNLLSTQATLIHGLAE
GVHIDSLSDDAPESASNGSSNDEVREPTDLEKWLTEFPDLLDVLLAERRVDEALSSLDEG
ERIASEAKEKKTLGHAVLFSLQTAIAERRQKLADQLAEIACQPSTRGAELRAAISALKKL
GDGPRAHSLLLNAHYQKYQFNMKNLRPSSTSYGGAYTAALSQLVFSAIAQAATDSLAIFG
KEPAYTSELVMWATKQTEAFALLVKRHALTSSAAAGGLRAAAECVQIALGHCSLLEARGL
ALCPVLLKLFRPSVEQALDANLKRIEESTAALAAADDWELTYPPSVTRTSGRPAGAVLGS
TGAYQHKLSSSAHRFNLMVQDFFEDVGPLLSMQLGGKALEGLFQVFNSYVNTLIRALPGS
IEDETSFEGSGNKIVRMAETEAQQIALLANASLLADELLPRAAMKLAPLNQANYKDDLQR
RASDRQSRHPEQREWKKRLVNSVDRLKDSFCQQHALDLIFTEEGDSHLSAEMYINMEGNA
DEIEWFPSLIFQELYVKLNRMAAIAADMFVGRERFAILLLMRLTETVILWLSQDQSFWDD
IEEGPRPLGHLGLQQFYLDMKFVTCFASQGRYLSRNLLRVVNDIISKAMSAFASTGMDPY
SVLPDDDWFTEIAQDAIERLSGKPKVANGERDLNSPTASVSAQSMSSVRSHGSY

Transcript Sequence

Gene sequence data has not been registered.